If peak detection is performed with findPeaks
setting argument stopOnError = FALSE
eventual errors during the
process do not cause to stop the processing but are recorded inside of
the resulting xcmsSet
object. These errors can be
accessed with the showError
method.
Usage
# S4 method for class 'xcmsSet'
showError(object, message. = TRUE, ...)
Arguments
- object
An xcmsSet
object.
- message.
Logical indicating whether only the error message, or the
error itself should be returned.
- ...
Additional arguments.
Value
A list of error messages (if message. = TRUE
) or errors or an
empty list if no errors are present.